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  5. AMTR_s00009p00194700

AMTR_s00009p00194700 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.124

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000388 (SeedPlants) Phylogenetic Tree(s): OG_06_0000388_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00194700
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AT1G10480 ZFP5 zinc finger protein 5 0.02 Archaeplastida
AT1G67030 ZFP6 zinc finger protein 6 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_12546 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os01g03840.1 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Pp3c6_19230V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.01 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e025728_P002 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!