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  5. AMTR_s00009p00207870

AMTR_s00009p00207870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.135

Description : Protein translocation.nucleus.nucleocytoplasmic transport.Ran GTPase


Gene families : OG0001686 (Archaeplastida) Phylogenetic Tree(s): OG0001686_tree ,
OG_05_0001807 (LandPlants) Phylogenetic Tree(s): OG_05_0001807_tree ,
OG_06_0002084 (SeedPlants) Phylogenetic Tree(s): OG_06_0002084_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00207870
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AT5G20020 RAN2 RAS-related GTP-binding nuclear protein 2 0.04 Archaeplastida
Cpa|evm.model.tig00000194.22 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Mp2g19920.1 No alias Ran GTPase 0.04 Archaeplastida
Pp3c23_8280V3.1 No alias RAN GTPase 3 0.03 Archaeplastida
Smo270966 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Solyc01g104700.4.1 No alias Ran GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0008653 lipopolysaccharide metabolic process IEP Neighborhood
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046417 chorismate metabolic process IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 171
No external refs found!