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  5. LOC_Os08g17450.1

LOC_Os08g17450.1


Description : no hits & (original description: none)


Gene families : OG0000164 (Archaeplastida) Phylogenetic Tree(s): OG0000164_tree ,
OG_05_0000068 (LandPlants) Phylogenetic Tree(s): OG_05_0000068_tree ,
OG_06_0000022 (SeedPlants) Phylogenetic Tree(s): OG_06_0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g17450.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.18 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g01200.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g13960.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g32510.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g36440.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os01g39740.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g17580.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g17810.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os02g18280.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os02g20810.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os02g21130.1 No alias no hits & (original description: none) 0.15 Archaeplastida
LOC_Os02g26070.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g32100.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g32870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g41690.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g45990.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g47250.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os02g49380.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g25580.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os03g30100.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g38270.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g63820.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g01760.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g11470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g11720.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g13100.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g17730.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g43260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g49040.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g54150.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g19080.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os05g31850.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g31940.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g31150.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g35190.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g37260.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g43330.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os06g44740.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g11180.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g14220.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g14790.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g17860.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g24320.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g24480.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g24560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g27570.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g40060.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g43110.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g03940.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g08400.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g08600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g12910.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g23540.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g25980.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g29080.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g32020.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g01990.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g12320.1 No alias no hits & (original description: none) 0.18 Archaeplastida
LOC_Os09g22020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g24790.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g27800.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g02150.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os10g03120.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os10g20220.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os10g40190.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os11g09290.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g14450.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g17160.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g20430.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g22180.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os11g23160.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g25290.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g25360.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g25950.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g10680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g15910.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g21680.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g22230.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g22690.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g24210.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g30270.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g33010.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g36130.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!