LOC_Os08g20570.1

Description : anion channel / anion:proton antiporter (CLC)

Gene families : OG0000546 (Archaeplastida) Phylogenetic Tree(s): OG0000546_tree ,
OG_05_0001113 (LandPlants) Phylogenetic Tree(s): OG_05_0001113_tree ,
OG_06_0020685 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g20570.1
Cluster	HCCA: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00099p00074960	evm_27.TU.AmTr_v1...	Solute transport.carrier-mediated transport.CLC anion...	0.04	Archaeplastida
AT3G27170	ATCLC-B, CLC-B	chloride channel B	0.05	Archaeplastida
AT5G40890	CLC-A, ATCLC-A,...	chloride channel A	0.06	Archaeplastida
GSVIVT01023156001	No alias	Solute transport.carrier-mediated transport.CLC anion...	0.02	Archaeplastida
GSVIVT01033108001	No alias	Solute transport.carrier-mediated transport.CLC anion...	0.02	Archaeplastida
Gb_17660	No alias	anion channel / anion:proton antiporter (CLC)	0.02	Archaeplastida
Smo100906	No alias	Solute transport.carrier-mediated transport.CLC anion...	0.02	Archaeplastida
Solyc02g068080.3.1	No alias	anion channel / anion:proton antiporter (CLC)	0.04	Archaeplastida
Solyc07g007690.4.1	No alias	anion channel / anion:proton antiporter (CLC)	0.06	Archaeplastida
Zm00001e013966_P001	No alias	anion channel / anion:proton antiporter (CLC)	0.05	Archaeplastida
Zm00001e014846_P001	No alias	anion channel / anion:proton antiporter (CLC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005244	voltage-gated ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated anion channel activity	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000644	CBS_dom	705	753
IPR001807	Cl-channel_volt-gated	136	556

External Links

No external refs found!

LOC_Os08g20570.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation