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  5. LOC_Os08g23540.1

LOC_Os08g23540.1


Description : no hits & (original description: none)


Gene families : OG0000164 (Archaeplastida) Phylogenetic Tree(s): OG0000164_tree ,
OG_05_0000068 (LandPlants) Phylogenetic Tree(s): OG_05_0000068_tree ,
OG_06_0000022 (SeedPlants) Phylogenetic Tree(s): OG_06_0000022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g23540.1
Cluster HCCA: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g01200.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g32510.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g36440.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g17580.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g17810.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g18280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g21130.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g32100.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os02g41690.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os02g45990.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os02g47250.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g14750.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g24800.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g25580.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g30100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g05820.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g11720.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g13100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g17730.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os04g23390.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os04g49040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g54150.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g19080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g24030.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g31850.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g41680.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g03260.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g43330.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g44740.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os07g13700.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g14220.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g14790.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os07g24800.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g40060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g43110.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g08400.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g08600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g12910.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g17450.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g32020.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g40340.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g01990.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os09g12320.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g14110.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g14210.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g27800.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g02150.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g03120.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g20220.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os10g34650.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g40190.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g09290.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g19120.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os11g19930.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g22180.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g25950.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g37290.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g11890.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g15910.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g22230.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g30270.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g33010.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!