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  5. LOC_Os08g24590.1

LOC_Os08g24590.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g24590.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04140.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g07820.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g08730.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g18200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g18260.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os01g19960.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g20190.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g21480.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g28184.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g36766.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g46330.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g71910.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g74210.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os02g16590.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os02g25560.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g37620.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g51230.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g07680.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os03g27520.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g43280.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os04g06100.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os04g20450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g22840.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g25590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g29440.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g34820.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g03950.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g14000.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g14460.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g18570.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os05g18990.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g27860.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g39460.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g50880.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os06g10380.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g15050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g21150.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g27900.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g33030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g35350.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g42500.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os06g42580.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g03350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g06030.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g09540.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g11850.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os07g17510.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os07g30750.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g32750.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os07g34090.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os07g39610.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os08g03730.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os08g08670.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g12280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g17120.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g27180.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g36730.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g02090.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g03040.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g11060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g14260.1 No alias Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os10g16800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g19326.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g03950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g23810.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g24870.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g31180.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g40960.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os11g44100.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g14200.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g22910.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g23240.1 No alias no hits & (original description: none) 0.15 Archaeplastida
LOC_Os12g24680.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os12g26070.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.12 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 821 932
No external refs found!