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  5. AMTR_s00009p00226220

AMTR_s00009p00226220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.175

Description : Solute transport.carrier-mediated transport.IT superfamily.putative silicon efflux transporter (LSI2-type)


Gene families : OG0001845 (Archaeplastida) Phylogenetic Tree(s): OG0001845_tree ,
OG_05_0001690 (LandPlants) Phylogenetic Tree(s): OG_05_0001690_tree ,
OG_06_0003853 (SeedPlants) Phylogenetic Tree(s): OG_06_0003853_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00226220
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00063100 evm_27.TU.AmTr_v1... Silicon efflux transporter LSI3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01035710001 No alias Solute transport.carrier-mediated transport.IT... 0.03 Archaeplastida
LOC_Os10g39980.1 No alias putative silicon efflux transporter (LSI2) 0.08 Archaeplastida
Pp3c3_31700V3.1 No alias Divalent ion symporter 0.07 Archaeplastida
Solyc06g036100.3.1 No alias putative silicon efflux transporter (LSI2) 0.06 Archaeplastida
Zm00001e023569_P001 No alias putative silicon efflux transporter (LSI2) 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 18 498
No external refs found!