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  5. LOC_Os08g28760.1

LOC_Os08g28760.1


Description : no hits & (original description: none)


Gene families : OG0000875 (Archaeplastida) Phylogenetic Tree(s): OG0000875_tree ,
OG_05_0000520 (LandPlants) Phylogenetic Tree(s): OG_05_0000520_tree ,
OG_06_0000249 (SeedPlants) Phylogenetic Tree(s): OG_06_0000249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g28760.1
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g19710.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g22140.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os01g24200.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g24890.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os01g31960.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os01g33609.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g13250.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os02g14550.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g19240.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os02g19250.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g21720.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os02g36090.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g46280.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os04g03610.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g04100.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os04g21360.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g24680.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g14410.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os06g15010.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os06g19510.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os06g21800.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g05330.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g11340.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g28600.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g15310.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g17730.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os08g17740.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os08g24290.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g01720.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os09g01750.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os09g08790.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os09g14770.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os09g22050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g18830.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g20980.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g09750.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g16630.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os11g19020.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os11g30740.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os12g09890.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g10940.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os12g15950.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os12g25020.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g29630.1 No alias no hits & (original description: none) 0.27 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!