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  5. LOC_Os08g29200.1

LOC_Os08g29200.1


Description : non-catalytic polygalacturonase regulator


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0001066 (SeedPlants) Phylogenetic Tree(s): OG_06_0001066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g29200.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00173800 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.03 Archaeplastida
AMTR_s00059p00088650 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00059p00190970 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00059p00191030 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00076p00180150 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00087p00099700 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G23760 JP630, PG3 BURP domain-containing protein 0.04 Archaeplastida
AT1G49320 USPL1, ATUSPL1 unknown seed protein like 1 0.04 Archaeplastida
AT1G60390 PG1 polygalacturonase 1 0.04 Archaeplastida
AT1G70370 PG2 polygalacturonase 2 0.05 Archaeplastida
AT5G25610 ATRD22, RD22 BURP domain-containing protein 0.06 Archaeplastida
GSVIVT01007771001 No alias Cell wall.pectin.modification and... 0.04 Archaeplastida
GSVIVT01013718001 No alias Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01035686001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01035702001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_01410 No alias non-catalytic polygalacturonase regulator 0.05 Archaeplastida
Gb_18274 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Gb_32942 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Gb_32944 No alias Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis... 0.03 Archaeplastida
Gb_32947 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Gb_39304 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.06 Archaeplastida
LOC_Os05g12400.1 No alias BURP domain-containing protein 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os05g12640.1 No alias BURP domain-containing protein 2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10428132g0010 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_19057g0010 No alias non-catalytic polygalacturonase regulator 0.1 Archaeplastida
MA_2153472g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_462957g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_577011g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5868745g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5913418g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_608446g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_63321g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_7645347g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8888577g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9294250g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_6690V3.1 No alias polygalacturonase 1 0.05 Archaeplastida
Pp3c16_15310V3.1 No alias polygalacturonase 1 0.02 Archaeplastida
Pp3c3_19890V3.1 No alias polygalacturonase 2 0.03 Archaeplastida
Pp3c4_21630V3.1 No alias polygalacturonase 1 0.04 Archaeplastida
Solyc02g062300.3.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.07 Archaeplastida
Solyc02g062310.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc02g062313.1.1 No alias BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc02g062317.1.1 No alias BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc02g062320.3.1 No alias BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Solyc05g005550.4.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Solyc05g005560.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g015300.4.1 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc08g068130.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Solyc08g068140.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e003182_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003438_P003 No alias Protein RAFTIN 1A OS=Triticum aestivum... 0.03 Archaeplastida
Zm00001e003891_P006 No alias BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e019897_P001 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e022326_P001 No alias non-catalytic polygalacturonase regulator 0.14 Archaeplastida
Zm00001e029096_P002 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.09 Archaeplastida
Zm00001e033843_P001 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 415 624
No external refs found!