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  5. LOC_Os08g29570.1

LOC_Os08g29570.1


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0001572 (LandPlants) Phylogenetic Tree(s): OG_05_0001572_tree ,
OG_06_0005088 (SeedPlants) Phylogenetic Tree(s): OG_06_0005088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g29570.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00224920 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00039p00225530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00056p00117010 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00068p00162220 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT2G29940 ATPDR3, PDR3 pleiotropic drug resistance 3 0.03 Archaeplastida
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.03 Archaeplastida
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 Archaeplastida
Cre04.g224500 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cre09.g395750 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01016991001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01016999001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017187001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017196001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017201001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017204001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01031378001 No alias Solute transport.primary active transport.ABC... 0.06 Archaeplastida
GSVIVT01034748001 No alias Solute transport.primary active transport.ABC... 0.06 Archaeplastida
GSVIVT01036184001 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Gb_05443 No alias subfamily ABCG transporter 0.03 Archaeplastida
Gb_30095 No alias subfamily ABCG transporter 0.03 Archaeplastida
Gb_34646 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 Archaeplastida
Gb_38109 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os01g24010.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os01g42370.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os07g33780.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_10427561g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Pp3c16_13830V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Pp3c16_9600V3.1 No alias pleiotropic drug resistance 11 0.02 Archaeplastida
Pp3c22_9340V3.1 No alias pleiotropic drug resistance 12 0.03 Archaeplastida
Pp3c5_3240V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Pp3c6_6330V3.1 No alias pleiotropic drug resistance 1 0.03 Archaeplastida
Smo412710 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo417263 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo441722 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo96729 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Solyc03g120980.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g055330.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc06g076930.2.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc08g067610.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc09g091660.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc12g019620.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc12g019640.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e006460_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e020666_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e020667_P001 No alias subfamily ABCG transporter 0.09 Archaeplastida
Zm00001e024257_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e037233_P001 No alias subfamily ABCG transporter 0.05 Archaeplastida
Zm00001e040575_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004788 thiamine diphosphokinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030975 thiamine binding IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042357 thiamine diphosphate metabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 221 373
IPR013525 ABC_2_trans 518 732
IPR013525 ABC_2_trans 1 68
IPR013581 PDR_assoc 73 135
No external refs found!