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  5. AMTR_s00009p00238260

AMTR_s00009p00238260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.203

Description : Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component


Gene families : OG0004638 (Archaeplastida) Phylogenetic Tree(s): OG0004638_tree ,
OG_05_0004590 (LandPlants) Phylogenetic Tree(s): OG_05_0004590_tree ,
OG_06_0006090 (SeedPlants) Phylogenetic Tree(s): OG_06_0006090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00238260
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Cre08.g379650 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 Archaeplastida
GSVIVT01009769001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 Archaeplastida
Smo98520 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019109 DUF4870 64 147
No external refs found!