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  5. LOC_Os08g29760.1

LOC_Os08g29760.1


Description : transport protein (TSUP)


Gene families : OG0000606 (Archaeplastida) Phylogenetic Tree(s): OG0000606_tree ,
OG_05_0001312 (LandPlants) Phylogenetic Tree(s): OG_05_0001312_tree ,
OG_06_0003294 (SeedPlants) Phylogenetic Tree(s): OG_06_0003294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g29760.1
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00049700 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.TOC... 0.03 Archaeplastida
AT4G21250 No alias Sulfite exporter TauE/SafE family protein 0.04 Archaeplastida
MA_87148g0010 No alias transport protein (TSUP) 0.03 Archaeplastida
Mp2g20460.1 No alias transport protein (TSUP) 0.02 Archaeplastida
Mp4g07590.1 No alias transport protein (TSUP) 0.02 Archaeplastida
Pp3c20_11021V3.1 No alias Sulfite exporter TauE/SafE family protein 0.02 Archaeplastida
Pp3c3_30550V3.1 No alias Sulfite exporter TauE/SafE family protein 0.02 Archaeplastida
Solyc08g068290.3.1 No alias transport protein (TSUP) 0.03 Archaeplastida
Zm00001e019604_P001 No alias transport protein (TSUP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002781 TM_pro_TauE-like 84 200
IPR002781 TM_pro_TauE-like 299 432
No external refs found!