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  5. AMTR_s00009p00240080

AMTR_s00009p00240080


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree ,
OG_06_0000125 (SeedPlants) Phylogenetic Tree(s): OG_06_0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00240080
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021038.65 No alias Histone H3.3a OS=Lilium longiflorum 0.01 Archaeplastida
Cre16.g661450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 Archaeplastida
GSVIVT01025318001 No alias Histone H3.2 OS=Pisum sativum 0.03 Archaeplastida
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.04 Archaeplastida
Gb_04505 No alias histone (H3) 0.03 Archaeplastida
Mp3g07730.1 No alias histone (H3) 0.03 Archaeplastida
Mp7g10700.1 No alias histone (H3) 0.02 Archaeplastida
Pp3c18_12280V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Solyc12g056540.1.1 No alias histone (H3) 0.03 Archaeplastida
Zm00001e014760_P001 No alias histone (H3) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 58 132
No external refs found!