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  5. LOC_Os08g32890.1

LOC_Os08g32890.1


Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana (sp|q39214|rpm1_arath : 276.0)


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0077207 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0065945 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g32890.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00126580 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
AT1G63730 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G18370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G38340 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G38344 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.04 Archaeplastida
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.03 Archaeplastida
AT5G46260 No alias disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G49140 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01003262001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 Archaeplastida
Gb_06500 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 Archaeplastida
Pp3c26_15380V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
Solyc01g102880.3.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc05g007850.2.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc11g011080.3.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc11g011090.1.1 No alias effector receptor (NLR) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 181 398
No external refs found!