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  5. LOC_Os08g33750.1

LOC_Os08g33750.1


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g33750.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00142p00049490 evm_27.TU.AmTr_v1... Nutrient uptake.phosphorus assimilation.phosphate... 0.02 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.08 Archaeplastida
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G02060 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT4G04605 No alias No description available 0.02 Archaeplastida
AT4G13640 UNE16 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.05 Archaeplastida
AT5G18240 ATMYR1, MYR1 myb-related protein 1 0.03 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01009589001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.06 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_05469 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_09291 No alias Protein PHR1-LIKE 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_17437 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_17469 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_25992 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g14490.1 No alias Putative Myb family transcription factor At1g14600... 0.06 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
LOC_Os04g56990.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_937875g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Mp4g08700.1 No alias G2-like GARP transcription factor 0.09 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c13_23440V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Pp3c13_9170V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c19_2940V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c20_7050V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c23_11010V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c2_310V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_23200V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c4_23130V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c4_6870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c8_8720V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Smo405399 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc03g006150.2.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Solyc10g083340.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g085620.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e001526_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.12 Archaeplastida
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e006632_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e007231_P002 No alias Putative Myb family transcription factor At1g14600... 0.09 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Zm00001e013199_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.1 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e021698_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e035893_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.1 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e039024_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e040203_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e041868_P002 No alias G2-like GARP transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 139 178
No external refs found!