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  5. LOC_Os08g33800.1

LOC_Os08g33800.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000116 (LandPlants) Phylogenetic Tree(s): OG_05_0000116_tree ,
OG_06_0000572 (SeedPlants) Phylogenetic Tree(s): OG_06_0000572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g33800.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00045p00146180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00210040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00091p00025820 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.06 Archaeplastida
AT1G74430 ATMYBCP66, MYB95, ATMYB95 myb domain protein 95 0.04 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.04 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.05 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.03 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.03 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.12 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.03 Archaeplastida
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.02 Archaeplastida
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.02 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.03 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.02 Archaeplastida
Cpa|evm.model.tig00000663.2 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cpa|evm.model.tig00021108.38 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre02.g108350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre16.g677382 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre16.g686250 No alias No description available 0.01 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008401001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01012778001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035461001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
Gb_06298 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_39081 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os04g45060.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10425867g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10431933g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_129382g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_308669g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_82197g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_89624g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9483804g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_95747g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c15_1270V3.1 No alias myb domain protein 86 0.03 Archaeplastida
Pp3c17_19947V3.1 No alias myb domain protein 88 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.06 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.01 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Smo90153 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g009650.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g055030.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g075660.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g008010.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g005890.3.1 No alias Transcription factor MYB101 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004115_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e005044_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028886_P003 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e033519_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034807_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!