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  5. LOC_Os08g33880.1

LOC_Os08g33880.1


Description : Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica (sp|q6z541|sap12_orysj : 206.0)


Gene families : OG0000339 (Archaeplastida) Phylogenetic Tree(s): OG0000339_tree ,
OG_05_0077216 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0065954 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g33880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00148670 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.02 Archaeplastida
GSVIVT01019930001 No alias Zinc finger A20 and AN1 domain-containing... 0.05 Archaeplastida
Gb_28341 No alias Zinc finger A20 and AN1 domain-containing... 0.04 Archaeplastida
LOC_Os09g31200.1 No alias Zinc finger A20 and AN1 domain-containing... 0.02 Archaeplastida
MA_126887g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Smo150464 No alias Zinc finger A20 and AN1 domain-containing... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000058 Znf_AN1 167 201
IPR002653 Znf_A20 19 42
IPR002653 Znf_A20 80 102
No external refs found!