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Description : RING-H2-class E3 ligase
Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001120 (LandPlants) Phylogenetic Tree(s): OG_05_0001120_tree ,
OG_06_0003795 (SeedPlants) Phylogenetic Tree(s): OG_06_0003795_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os08g34550.1 | |
| Cluster | HCCA: Cluster_234 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00176670 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
| AMTR_s00077p00074350 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
| AMTR_s00088p00040490 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
| AMTR_s00102p00069840 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| AT3G14320 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.02 | Archaeplastida | |
| AT3G61550 | No alias | RING/U-box superfamily protein | 0.05 | Archaeplastida | |
| AT4G17905 | ATL4H | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT5G06490 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT5G07040 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT5G17600 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| AT5G42200 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01009096001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| GSVIVT01012020001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| GSVIVT01013145001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
| GSVIVT01024698001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| GSVIVT01028306001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | Archaeplastida | |
| GSVIVT01036593001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
| Gb_14778 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Gb_15297 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Gb_32878 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Gb_41385 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os02g43120.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| LOC_Os02g46100.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| LOC_Os02g54830.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os02g57460.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os05g07140.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| LOC_Os06g07100.2 | No alias | RING-H2-class E3 ligase | 0.05 | Archaeplastida | |
| LOC_Os10g39450.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_10021g0010 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| MA_10260361g0010 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| MA_10435495g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| MA_105610g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_125507g0010 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| MA_229590g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| MA_391590g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_462422g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_754688g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_9764263g0010 | No alias | RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Mp5g08270.1 | No alias | RING-H2-class E3 ligase | 0.05 | Archaeplastida | |
| Pp3c14_14600V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Pp3c17_13190V3.1 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| Pp3c20_12240V3.1 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
| Pp3c22_15440V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Pp3c26_11650V3.1 | No alias | TOXICOS EN LEVADURA 2 | 0.02 | Archaeplastida | |
| Pp3c4_30240V3.1 | No alias | TOXICOS EN LEVADURA 2 | 0.02 | Archaeplastida | |
| Pp3c5_4170V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Solyc01g109200.4.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Solyc02g087040.1.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Solyc04g074790.3.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Solyc05g055140.1.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Solyc06g061250.3.1 | No alias | RING-H2-class E3 ligase | 0.05 | Archaeplastida | |
| Solyc07g006360.1.1 | No alias | RING-H2-class E3 ligase | 0.07 | Archaeplastida | |
| Solyc09g089890.1.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Solyc10g011880.1.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| Solyc12g087840.1.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e007103_P001 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Zm00001e014286_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e014302_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e015259_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e015449_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e015495_P001 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Zm00001e022175_P001 | No alias | RING-H2-class E3 ligase | 0.09 | Archaeplastida | |
| Zm00001e023515_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e023908_P006 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e029086_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e031105_P001 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| Zm00001e039314_P001 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0010215 | cellulose microfibril organization | IEP | Neighborhood |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Neighborhood |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| BP | GO:0030198 | extracellular matrix organization | IEP | Neighborhood |
| MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
| CC | GO:0031225 | anchored component of membrane | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0040008 | regulation of growth | IEP | Neighborhood |
| BP | GO:0043062 | extracellular structure organization | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0045927 | positive regulation of growth | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 152 | 195 |
| No external refs found! |