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  5. AMTR_s00009p00247110

AMTR_s00009p00247110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.242

Description : F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana


Gene families : OG0008249 (Archaeplastida) Phylogenetic Tree(s): OG0008249_tree ,
OG_05_0006953 (LandPlants) Phylogenetic Tree(s): OG_05_0006953_tree ,
OG_06_0008197 (SeedPlants) Phylogenetic Tree(s): OG_06_0008197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00247110
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
MA_135002g0010 No alias F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006652 Kelch_1 163 203
IPR006652 Kelch_1 116 159
No external refs found!