Description : plant-specific E3 ubiquitin ligase (RSL/RFA)
Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0000889 (LandPlants) Phylogenetic Tree(s): OG_05_0000889_tree ,
OG_06_0000875 (SeedPlants) Phylogenetic Tree(s): OG_06_0000875_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os08g35070.1 | |
Cluster | HCCA: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00129p00117090 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
AT2G25360 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
AT3G45460 | No alias | IBR domain containing protein | 0.02 | Archaeplastida | |
AT3G45500 | No alias | BEST Arabidopsis thaliana protein match is: RING/U-box... | 0.02 | Archaeplastida | |
AT3G45560 | No alias | zinc finger (C3HC4-type RING finger) family protein | 0.02 | Archaeplastida | |
LOC_Os09g25220.1 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.03 | Archaeplastida | |
Solyc01g110080.2.1 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.02 | Archaeplastida | |
Zm00001e022191_P001 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.02 | Archaeplastida | |
Zm00001e034155_P001 | No alias | plant-specific E3 ubiquitin ligase (RSL/RFA) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001510 | RNA methylation | IEP | Neighborhood |
MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
BP | GO:0036260 | RNA capping | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
No external refs found! |