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  5. LOC_Os08g36390.1

LOC_Os08g36390.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g36390.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT1G03840 MGP C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT2G01940 ATIDD15, SGR5 C2H2-like zinc finger protein 0.03 Archaeplastida
AT3G13810 IDD11, AtIDD11 indeterminate(ID)-domain 11 0.03 Archaeplastida
AT4G02670 AtIDD12, IDD12 indeterminate(ID)-domain 12 0.04 Archaeplastida
AT5G44160 NUC C2H2-like zinc finger protein 0.03 Archaeplastida
AT5G66730 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
GSVIVT01003119001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_17209 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os01g14010.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g10140.1 No alias C2H2 zinc finger transcription factor. elicitor peptide... 0.03 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.04 Archaeplastida
Solyc03g098070.3.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc03g121660.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g062670.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc07g053570.4.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g007550.3.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc11g069240.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e004751_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e025973_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e026143_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e035365_P003 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!