Description : component NDC80 of NDC80 outer kinetochore complex
Gene families : OG0002464 (Archaeplastida) Phylogenetic Tree(s): OG0002464_tree ,
OG_05_0002250 (LandPlants) Phylogenetic Tree(s): OG_05_0002250_tree ,
OG_06_0001822 (SeedPlants) Phylogenetic Tree(s): OG_06_0001822_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os08g36490.1 | |
Cluster | HCCA: Cluster_257 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00005p00253530 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.chromosome... | 0.02 | Archaeplastida | |
AT3G54630 | No alias | CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80... | 0.04 | Archaeplastida | |
Cpa|evm.model.tig00021621.13 | No alias | Cell cycle.mitosis and meiosis.chromosome... | 0.02 | Archaeplastida | |
Cre02.g098300 | No alias | Cell cycle.mitosis and meiosis.chromosome... | 0.02 | Archaeplastida | |
GSVIVT01013912001 | No alias | Protein degradation.peptidase families.cysteine-type... | 0.02 | Archaeplastida | |
Solyc01g104570.4.1 | No alias | component NDC80 of NDC80 outer kinetochore complex | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0031262 | Ndc80 complex | IEA | Interproscan |
BP | GO:0051315 | attachment of mitotic spindle microtubules to kinetochore | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
CC | GO:0005732 | small nucleolar ribonucleoprotein complex | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006479 | protein methylation | IEP | Neighborhood |
BP | GO:0006996 | organelle organization | IEP | Neighborhood |
BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0016458 | gene silencing | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
BP | GO:0016571 | histone methylation | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
MF | GO:0031491 | nucleosome binding | IEP | Neighborhood |
BP | GO:0032259 | methylation | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
CC | GO:0034457 | Mpp10 complex | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
CC | GO:0044452 | nucleolar part | IEP | Neighborhood |
MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005550 | Kinetochore_Ndc80 | 290 | 363 |
No external refs found! |