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  5. LOC_Os08g37940.1

LOC_Os08g37940.1


Description : Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana (sp|q680k2|gppl1_arath : 389.0)


Gene families : OG0005745 (Archaeplastida) Phylogenetic Tree(s): OG0005745_tree ,
OG_05_0007380 (LandPlants) Phylogenetic Tree(s): OG_05_0007380_tree ,
OG_06_0008950 (SeedPlants) Phylogenetic Tree(s): OG_06_0008950_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g37940.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT4G39970 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Archaeplastida
Cre14.g623000 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.02 Archaeplastida
GSVIVT01006627001 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.07 Archaeplastida
Gb_32746 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.04 Archaeplastida
MA_137202g0010 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.05 Archaeplastida
Mp5g22600.1 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.03 Archaeplastida
Pp3c5_20370V3.1 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Archaeplastida
Solyc11g009020.2.1 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.07 Archaeplastida
Zm00001e006565_P001 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!