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  5. LOC_Os08g38460.1

LOC_Os08g38460.1


Description : ubiquitin protein ligase (XERICO)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g38460.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00263220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00002p00203540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00006p00267830 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase 0.04 Archaeplastida
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G15100 RHA2A RING-H2 finger A2A 0.02 Archaeplastida
AT1G22500 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G24580 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G74410 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G76410 ATL8 RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.06 Archaeplastida
AT2G27940 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60220 ATL4, TL4 TOXICOS EN LEVADURA 4 0.02 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G62690 ATL5 AtL5 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G17905 ATL4H RING/U-box superfamily protein 0.03 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.06 Archaeplastida
AT4G35840 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G47610 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G57750 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.03 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00020629.137 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01019592001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01030125001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_14821 No alias RHA2 signal transducer of abscisic acid perception 0.06 Archaeplastida
Gb_20666 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_22087 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g39936.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10208579g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10431161g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10432957g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_129306g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_377006g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_402876g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_51630g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_711804g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_94359g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_96368g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo121181 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc01g088440.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g095180.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc05g008640.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g018760.3.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc08g082680.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005310.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e009017_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e015259_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015477_P001 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e019438_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e036085_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e041824_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 142
No external refs found!