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  5. LOC_Os08g39550.1

LOC_Os08g39550.1


Description : DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana (sp|q00874|dr100_arath : 380.0)


Gene families : OG0000718 (Archaeplastida) Phylogenetic Tree(s): OG0000718_tree ,
OG_05_0000423 (LandPlants) Phylogenetic Tree(s): OG_05_0000423_tree ,
OG_06_0010163 (SeedPlants) Phylogenetic Tree(s): OG_06_0010163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g39550.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G33670 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT3G12610 DRT100 Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
AT3G20820 No alias Leucine-rich repeat (LRR) family protein 0.09 Archaeplastida
AT5G12940 No alias Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
GSVIVT01018835001 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.04 Archaeplastida
GSVIVT01034362001 No alias Receptor-like protein kinase 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01037229001 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.04 Archaeplastida
Gb_01061 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.03 Archaeplastida
Gb_14890 No alias Probable leucine-rich repeat receptor-like protein... 0.03 Archaeplastida
Gb_34782 No alias MDIS1-interacting receptor like kinase 2 OS=Arabidopsis... 0.04 Archaeplastida
Gb_37822 No alias Probable leucine-rich repeat receptor-like protein... 0.04 Archaeplastida
MA_10428709g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_124133g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_54719g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6800g0010 No alias Leucine-rich repeat receptor-like... 0.03 Archaeplastida
Mp1g09700.1 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.03 Archaeplastida
Mp4g21430.1 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.04 Archaeplastida
Pp3c4_1760V3.1 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
Solyc01g086920.3.1 No alias DNA damage-repair/toleration protein DRT100... 0.03 Archaeplastida
Solyc04g008830.1.1 No alias Leucine-rich repeat receptor-like protein kinase PXC2... 0.03 Archaeplastida
Solyc10g052880.1.1 No alias Probably inactive leucine-rich repeat receptor-like... 0.03 Archaeplastida
Solyc11g056680.1.1 No alias DNA damage-repair/toleration protein DRT100... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006571 tyrosine biosynthetic process IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 289 347
IPR001611 Leu-rich_rpt 143 203
IPR013210 LRR_N_plant-typ 36 74
No external refs found!