AMTR_s00009p00257000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.292

Description : COP1-interactive protein 1 OS=Arabidopsis thaliana


Gene families : OG0000920 (Archaeplastida) Phylogenetic Tree(s): OG0000920_tree ,
OG_05_0000667 (LandPlants) Phylogenetic Tree(s): OG_05_0000667_tree ,
OG_06_0004178 (SeedPlants) Phylogenetic Tree(s): OG_06_0004178_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00257000
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008971001 No alias No description available 0.02 Archaeplastida
LOC_Os03g01710.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g21940.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g36060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10431386g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e004411_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e012583_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019448 NT-C2 30 143
No external refs found!