LOC_Os08g41730.1

Description : component beta type-6 of 26S proteasome

Gene families : OG0004085 (Archaeplastida) Phylogenetic Tree(s): OG0004085_tree ,
OG_05_0004491 (LandPlants) Phylogenetic Tree(s): OG_05_0004491_tree ,
OG_06_0005401 (SeedPlants) Phylogenetic Tree(s): OG_06_0005401_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g41730.1
Cluster	HCCA: Cluster_194

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01027613001	No alias	Protein degradation.26S proteasome.20S core...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
CC	GO:0005758	mitochondrial intermembrane space	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0016530	metallochaperone activity	IEP	Neighborhood
MF	GO:0016531	copper chaperone activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
CC	GO:0031970	organelle envelope lumen	IEP	Neighborhood
CC	GO:0031974	membrane-enclosed lumen	IEP	Neighborhood
CC	GO:0043233	organelle lumen	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
CC	GO:0070013	intracellular organelle lumen	IEP	Neighborhood
MF	GO:0140104	molecular carrier activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	9	204

External Links

No external refs found!