Description : transcription factor (SBP)
Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os08g41940.1 | |
Cluster | HCCA: Cluster_13 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00013p00150040 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.SBP... | 0.05 | Archaeplastida | |
AMTR_s00019p00235390 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.SBP... | 0.03 | Archaeplastida | |
AMTR_s00022p00198330 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.SBP... | 0.03 | Archaeplastida | |
AMTR_s00047p00197010 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.SBP... | 0.02 | Archaeplastida | |
AMTR_s00106p00142470 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.SBP... | 0.05 | Archaeplastida | |
AMTR_s00106p00142740 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
AMTR_s00106p00144050 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.SBP... | 0.07 | Archaeplastida | |
AT1G27360 | SPL11 | squamosa promoter-like 11 | 0.04 | Archaeplastida | |
AT5G43270 | SPL2 | squamosa promoter binding protein-like 2 | 0.03 | Archaeplastida | |
GSVIVT01010496001 | No alias | RNA biosynthesis.transcriptional activation.SBP... | 0.02 | Archaeplastida | |
GSVIVT01033519001 | No alias | RNA biosynthesis.transcriptional activation.SBP... | 0.04 | Archaeplastida | |
Gb_02576 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Gb_03922 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
Gb_22010 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
Gb_26600 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Gb_32703 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Gb_38013 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Gb_38014 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
LOC_Os02g04680.1 | No alias | transcription factor (SBP) | 0.01 | Archaeplastida | |
LOC_Os07g32170.1 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
MA_10435426g0010 | No alias | transcription factor (SBP) | 0.04 | Archaeplastida | |
Pp3c16_7490V3.1 | No alias | squamosa promoter binding protein-like 2 | 0.04 | Archaeplastida | |
Pp3c25_8610V3.1 | No alias | squamosa promoter binding protein-like 8 | 0.02 | Archaeplastida | |
Pp3c4_6000V3.1 | No alias | squamosa promoter binding protein-like 8 | 0.02 | Archaeplastida | |
Solyc05g015840.3.1 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Solyc07g062980.4.1 | No alias | transcription factor (SBP) | 0.05 | Archaeplastida | |
Solyc10g009080.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc10g018780.3.1 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Solyc12g038520.3.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Zm00001e006686_P001 | No alias | transcription factor (SBP) | 0.06 | Archaeplastida | |
Zm00001e013795_P002 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
Zm00001e021962_P003 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Zm00001e025234_P001 | No alias | transcription factor (SBP) | 0.05 | Archaeplastida | |
Zm00001e028442_P002 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
Zm00001e034628_P001 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
Zm00001e037693_P001 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
Zm00001e041822_P001 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Neighborhood |
MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Neighborhood |
BP | GO:0006417 | regulation of translation | IEP | Neighborhood |
BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
BP | GO:0009606 | tropism | IEP | Neighborhood |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010274 | hydrotropism | IEP | Neighborhood |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Neighborhood |
MF | GO:0015020 | glucuronosyltransferase activity | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
MF | GO:0016843 | amine-lyase activity | IEP | Neighborhood |
MF | GO:0016844 | strictosidine synthase activity | IEP | Neighborhood |
BP | GO:0017148 | negative regulation of translation | IEP | Neighborhood |
MF | GO:0030597 | RNA glycosylase activity | IEP | Neighborhood |
MF | GO:0030598 | rRNA N-glycosylase activity | IEP | Neighborhood |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0032269 | negative regulation of cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Neighborhood |
BP | GO:0070085 | glycosylation | IEP | Neighborhood |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Neighborhood |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004333 | SBP_dom | 118 | 191 |
No external refs found! |