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  5. LOC_Os08g42850.4

LOC_Os08g42850.4


Description : protein folding catalyst (FKBP)


Gene families : OG0000455 (Archaeplastida) Phylogenetic Tree(s): OG0000455_tree ,
OG_05_0000843 (LandPlants) Phylogenetic Tree(s): OG_05_0000843_tree ,
OG_06_0000775 (SeedPlants) Phylogenetic Tree(s): OG_06_0000775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42850.4
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT2G43560 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.04 Archaeplastida
AT4G39710 FKBP16-2 FK506-binding protein 16-2 0.02 Archaeplastida
AT5G45680 ATFKBP13, FKBP13 FK506-binding protein 13 0.05 Archaeplastida
Cre10.g454250 No alias Protein modification.protein folding and quality... 0.03 Archaeplastida
Cre11.g479050 No alias Protein modification.protein folding and quality... 0.01 Archaeplastida
Cre16.g675500 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
GSVIVT01012171001 No alias Protein modification.protein folding and quality... 0.04 Archaeplastida
GSVIVT01022183001 No alias Protein modification.protein folding and quality... 0.08 Archaeplastida
GSVIVT01038097001 No alias Protein modification.protein folding and quality... 0.13 Archaeplastida
MA_91136g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_929563g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp2g06290.1 No alias protein folding catalyst (FKBP) 0.08 Archaeplastida
Mp5g18010.1 No alias protein folding catalyst (FKBP) 0.03 Archaeplastida
Mp6g04000.1 No alias protein folding catalyst (FKBP) 0.09 Archaeplastida
Pp3c1_3210V3.1 No alias FK506-binding protein 13 0.02 Archaeplastida
Pp3c4_8140V3.1 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.07 Archaeplastida
Smo122401 No alias Protein modification.protein folding and quality... 0.03 Archaeplastida
Smo48620 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
Solyc04g015040.3.1 No alias protein folding catalyst (FKBP) 0.05 Archaeplastida
Solyc04g054520.3.1 No alias component PnsL4 of NDH lumen subcomplex L. protein... 0.06 Archaeplastida
Solyc08g006540.4.1 No alias protein folding catalyst (FKBP) 0.05 Archaeplastida
Zm00001e003727_P001 No alias protein folding catalyst (FKBP) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 163 224
No external refs found!