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  5. LOC_Os08g42930.1

LOC_Os08g42930.1


Description : Disease resistance protein RGA2 OS=Solanum bulbocastanum (sp|q7xbq9|rga2_solbu : 323.0)


Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0011008 (SeedPlants) Phylogenetic Tree(s): OG_06_0011008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42930.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AT3G14470 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
GSVIVT01001399001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.03 Archaeplastida
GSVIVT01011193001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01013307001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01013508001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.02 Archaeplastida
GSVIVT01013535001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01022856001 No alias Putative disease resistance RPP13-like protein 1... 0.05 Archaeplastida
GSVIVT01031998001 No alias Putative disease resistance protein At3g14460... 0.03 Archaeplastida
GSVIVT01032204001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.03 Archaeplastida
GSVIVT01036657001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
GSVIVT01038298001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
LOC_Os07g17220.1 No alias Putative disease resistance protein At3g14460... 0.04 Archaeplastida
LOC_Os08g43000.1 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.05 Archaeplastida
LOC_Os09g14490.1 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
Zm00001e031999_P001 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 113 347
No external refs found!