LOC_Os08g42960.1


Description : Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana (sp|q6aww5|y5262_arath : 416.0)


Gene families : OG0000647 (Archaeplastida) Phylogenetic Tree(s): OG0000647_tree ,
OG_05_0000409 (LandPlants) Phylogenetic Tree(s): OG_05_0000409_tree ,
OG_06_0001573 (SeedPlants) Phylogenetic Tree(s): OG_06_0001573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42960.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01038244001 No alias Ankyrin repeat-containing protein At5g02620... 0.04 Archaeplastida
Solyc12g096670.2.1 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
Zm00001e015750_P001 No alias Ankyrin repeat-containing protein At2g01680... 0.03 Archaeplastida
Zm00001e023497_P001 No alias Ankyrin repeat-containing protein At2g01680... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 184 246
IPR020683 Ankyrin_rpt-contain_dom 116 180
IPR020683 Ankyrin_rpt-contain_dom 44 106
IPR026961 PGG_dom 370 484
No external refs found!