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  5. LOC_Os08g43000.1

LOC_Os08g43000.1


Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum (sp|q7xa40|rga3_solbu : 408.0)


Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0011008 (SeedPlants) Phylogenetic Tree(s): OG_06_0011008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43000.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000639001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01000656001 No alias Putative disease resistance protein At3g14460... 0.03 Archaeplastida
GSVIVT01001399001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.03 Archaeplastida
GSVIVT01011193001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01013307001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01013533001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01019351001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.03 Archaeplastida
GSVIVT01022937001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01031998001 No alias Putative disease resistance protein At3g14460... 0.03 Archaeplastida
GSVIVT01032204001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.04 Archaeplastida
LOC_Os07g17220.1 No alias Putative disease resistance protein At3g14460... 0.04 Archaeplastida
LOC_Os08g42930.1 No alias Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.05 Archaeplastida
LOC_Os08g43010.1 No alias Putative disease resistance protein RGA1 OS=Solanum... 0.03 Archaeplastida
LOC_Os09g14490.1 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
LOC_Os09g20030.1 No alias Putative disease resistance RPP13-like protein 1... 0.05 Archaeplastida
LOC_Os11g29110.1 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.05 Archaeplastida
Zm00001e031999_P001 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 173 401
No external refs found!