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  5. LOC_Os08g43670.1

LOC_Os08g43670.1


Description : NEP1-interacting protein 2 OS=Arabidopsis thaliana (sp|q8gt74|nip2_arath : 159.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001256 (LandPlants) Phylogenetic Tree(s): OG_05_0001256_tree ,
OG_06_0001765 (SeedPlants) Phylogenetic Tree(s): OG_06_0001765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43670.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00263220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00002p00203540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00004p00172400 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
AMTR_s00006p00267830 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase 0.02 Archaeplastida
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G15100 RHA2A RING-H2 finger A2A 0.02 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.04 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.03 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G05200 ATL6 RING/U-box superfamily protein 0.04 Archaeplastida
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.03 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT4G09100 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G11360 RHA1B RING-H2 finger A1B 0.03 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G17905 ATL4H RING/U-box superfamily protein 0.03 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.03 Archaeplastida
AT4G35840 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G05280 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.03 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01008756001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01024698001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01027524001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01037651001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01038717001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_04644 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04645 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_05005 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.03 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14762 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_14821 No alias RHA2 signal transducer of abscisic acid perception 0.01 Archaeplastida
Gb_15836 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20700 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os09g29310.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os10g39770.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10106144g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10208579g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10433358g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_152102g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_26001g0020 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_3380g0010 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_393170g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_552961g0010 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_569551g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_9143538g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_92848g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c19_14050V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c6_19030V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo101273 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo39820 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc02g067680.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g033330.3.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc04g054370.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc05g055390.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g007230.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g063110.3.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Solyc08g081370.1.1 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 Archaeplastida
Solyc09g010650.1.1 No alias RING-H2 finger protein ATL33 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e009017_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009988_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014302_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015259_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e019438_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e020958_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022538_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023238_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023260_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e024702_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041824_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 202 244
No external refs found!