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  5. LOC_Os08g44190.1

LOC_Os08g44190.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000387 (SeedPlants) Phylogenetic Tree(s): OG_06_0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g44190.1
Cluster HCCA: Cluster_251

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    Target Alias Description ECC score Gene Family Method Actions
    AMTR_s00019p00212840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
    AMTR_s00024p00186840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
    AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
    AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
    AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
    AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
    AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
    AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
    AT1G10480 ZFP5 zinc finger protein 5 0.03 Archaeplastida
    AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
    AT1G66140 ZFP4 zinc finger protein 4 0.03 Archaeplastida
    AT3G09290 TAC1 telomerase activator1 0.03 Archaeplastida
    AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
    AT5G25160 ZFP3 zinc finger protein 3 0.02 Archaeplastida
    AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.03 Archaeplastida
    GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
    GSVIVT01016493001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
    GSVIVT01027720001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
    GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
    Gb_04808 No alias no hits & (original description: none) 0.03 Archaeplastida
    LOC_Os09g27320.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
    MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
    MA_113057g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
    MA_126188g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
    MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
    Pp3c23_2190V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
    Pp3c23_960V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
    Pp3c5_6880V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
    Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
    Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
    Solyc06g053720.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
    Solyc10g049870.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
    Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
    Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
    Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
    Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
    Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
    Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
    Zm00001e030783_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
    Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
    Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
    Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
    Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
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    Type GO Term Name Evidence Source
    BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
    MF GO:0005506 iron ion binding IEP Neighborhood
    BP GO:0006417 regulation of translation IEP Neighborhood
    BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
    BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
    BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
    BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
    BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
    BP GO:0010629 negative regulation of gene expression IEP Neighborhood
    MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
    MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
    BP GO:0017148 negative regulation of translation IEP Neighborhood
    MF GO:0030597 RNA glycosylase activity IEP Neighborhood
    MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
    BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
    BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
    BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
    BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
    BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
    BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
    BP GO:0035556 intracellular signal transduction IEP Neighborhood
    BP GO:0048519 negative regulation of biological process IEP Neighborhood
    BP GO:0048523 negative regulation of cellular process IEP Neighborhood
    BP GO:0050789 regulation of biological process IEP Neighborhood
    BP GO:0050794 regulation of cellular process IEP Neighborhood
    BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
    BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
    BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
    BP GO:0065007 biological regulation IEP Neighborhood
    MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
    BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood

    No InterPro domains available for this sequence

    No external refs found!