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  5. AMTR_s00009p00260540

AMTR_s00009p00260540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.320

Description : Probable histone acetyltransferase HAC-like 1 OS=Oryza sativa subsp. japonica


Gene families : OG0009994 (Archaeplastida) Phylogenetic Tree(s): OG0009994_tree ,
OG_05_0009647 (LandPlants) Phylogenetic Tree(s): OG_05_0009647_tree ,
OG_06_0010118 (SeedPlants) Phylogenetic Tree(s): OG_06_0010118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00260540
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00260830 evm_27.TU.AmTr_v1... Histone acetyltransferase HAC1 OS=Arabidopsis thaliana 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0017089 glycolipid transporter activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0046836 glycolipid transport IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0051861 glycolipid binding IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!