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LOC_Os08g44390.1


Description : Probable calcium-binding protein CML48 OS=Arabidopsis thaliana (sp|q9zqh1|cml48_arath : 150.0)


Gene families : OG0002738 (Archaeplastida) Phylogenetic Tree(s): OG0002738_tree ,
OG_05_0002458 (LandPlants) Phylogenetic Tree(s): OG_05_0002458_tree ,
OG_06_0002430 (SeedPlants) Phylogenetic Tree(s): OG_06_0002430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g44390.1
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01203p00002490 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML49 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G10300 No alias Calcium-binding EF-hand family protein 0.02 Archaeplastida
Cpa|evm.model.tig00001003.12 No alias No description available 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 153 181
IPR002048 EF_hand_dom 83 110
No external refs found!