LOC_Os09g03370.1

Description : Structural maintenance of chromosomes protein 6A OS=Arabidopsis thaliana (sp|q9flr5|smc6a_arath : 172.0)

Gene families : OG0003544 (Archaeplastida) Phylogenetic Tree(s): OG0003544_tree ,
OG_05_0004204 (LandPlants) Phylogenetic Tree(s): OG_05_0004204_tree ,
OG_06_0005488 (SeedPlants) Phylogenetic Tree(s): OG_06_0005488_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g03370.1
Cluster	HCCA: Cluster_297

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00106p00113730	evm_27.TU.AmTr_v1...	DNA damage response.DNA repair mechanisms.homologous...	0.02	Archaeplastida
Mp7g10380.1	No alias	component SMC6 of homologous recombination repair...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	Neighborhood
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006354	DNA-templated transcription, elongation	IEP	Neighborhood
BP	GO:0006368	transcription elongation from RNA polymerase II promoter	IEP	Neighborhood
CC	GO:0008023	transcription elongation factor complex	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
CC	GO:0016593	Cdc73/Paf1 complex	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
CC	GO:0031262	Ndc80 complex	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR038729	Rad50/SbcC_AAA	7	68

External Links

No external refs found!