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  5. LOC_Os09g04540.1

LOC_Os09g04540.1


Description : no hits & (original description: none)


Gene families : OG0000098 (Archaeplastida) Phylogenetic Tree(s): OG0000098_tree ,
OG_05_0000033 (LandPlants) Phylogenetic Tree(s): OG_05_0000033_tree ,
OG_06_0000010 (SeedPlants) Phylogenetic Tree(s): OG_06_0000010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g04540.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.23 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g06200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g19660.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os01g35080.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os01g35470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g41500.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os01g66450.1 No alias no hits & (original description: none) 0.16 Archaeplastida
LOC_Os02g18200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g25140.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g25440.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g27630.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g35280.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os03g03220.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os03g03240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g29660.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os03g31640.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g36470.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os04g01190.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os04g02200.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g03950.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g06600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g10190.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os04g13020.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g14870.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g17720.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os04g19910.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os04g21380.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g24080.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g24390.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os04g28900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g49810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g53270.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g04430.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g16680.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g17040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g17970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g20370.1 No alias no hits & (original description: none) 0.19 Archaeplastida
LOC_Os05g24840.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g24950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g28560.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os05g31430.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g32040.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g41860.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g14600.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g22790.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os06g23080.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g25630.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g27950.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os06g29060.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os06g31630.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g35380.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g36140.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g38410.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g47370.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g48460.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g07830.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g11230.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os07g14950.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os07g18200.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os07g20690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g26800.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os07g30570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g44520.1 No alias no hits & (original description: none) 0.19 Archaeplastida
LOC_Os08g13500.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g13560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g19460.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g27300.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g29920.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g33250.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g01350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g07250.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os09g08240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g09800.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g10080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g11030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g14740.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g15140.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os09g16690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g22350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g11930.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os10g12280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g17230.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g24770.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g31600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g40160.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g07720.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g10830.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g15100.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g22020.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os11g22690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g22710.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os11g23090.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os11g28560.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os11g28720.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g28790.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os11g29450.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g35690.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g44050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g05500.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os12g14270.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g16820.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os12g16960.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g18030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g20350.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g23640.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g23910.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g26740.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os12g28280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g28340.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g31180.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g37330.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g43280.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!