1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G31370

AT1G31370


Description : Ubiquitin-specific protease family C19-related protein


Gene families : OG0002414 (Archaeplastida) Phylogenetic Tree(s): OG0002414_tree ,
OG_05_0001602 (LandPlants) Phylogenetic Tree(s): OG_05_0001602_tree ,
OG_06_0000866 (SeedPlants) Phylogenetic Tree(s): OG_06_0000866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G31370
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G31400 No alias TRAF-like family protein 0.04 Archaeplastida
AT2G01790 No alias TRAF-like family protein 0.03 Archaeplastida
AT2G42455 No alias No description available 0.06 Archaeplastida
AT2G42460 No alias TRAF-like family protein 0.05 Archaeplastida
AT2G42470 No alias TRAF-like family protein 0.04 Archaeplastida
AT2G42475 No alias No description available 0.04 Archaeplastida
AT2G42480 No alias TRAF-like family protein 0.05 Archaeplastida
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.03 Archaeplastida
AT3G44805 No alias TRAF-like superfamily protein 0.06 Archaeplastida
AT3G58210 No alias TRAF-like family protein 0.01 Archaeplastida
AT3G58220 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G58240 No alias TRAF-like superfamily protein 0.03 Archaeplastida
AT3G58260 No alias TRAF-like family protein 0.04 Archaeplastida
AT3G58280 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.05 Archaeplastida
AT3G58290 No alias TRAF-like superfamily protein 0.04 Archaeplastida
AT3G58340 No alias TRAF-like family protein 0.04 Archaeplastida
AT3G58370 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G58400 No alias TRAF-like family protein 0.01 Archaeplastida
AT3G58420 No alias TRAF-like superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Neighborhood
BP GO:0006266 DNA ligation IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006446 regulation of translational initiation IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0045947 negative regulation of translational initiation IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!