1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os09g08430.1

LOC_Os09g08430.1


Description : component RPL17 of LSU proteome component


Gene families : OG0001876 (Archaeplastida) Phylogenetic Tree(s): OG0001876_tree ,
OG_05_0001644 (LandPlants) Phylogenetic Tree(s): OG_05_0001644_tree ,
OG_06_0001980 (SeedPlants) Phylogenetic Tree(s): OG_06_0001980_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g08430.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00159640 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
AMTR_s00013p00211990 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
AMTR_s00013p00223470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
AMTR_s00013p00224030 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
AMTR_s00013p00225150 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
AT1G27400 No alias Ribosomal protein L22p/L17e family protein 0.36 Archaeplastida
AT1G67430 No alias Ribosomal protein L22p/L17e family protein 0.25 Archaeplastida
Cpa|evm.model.tig00001215.8 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
Cre13.g568900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.31 Archaeplastida
GSVIVT01008528001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
GSVIVT01010449001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01010450001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
MA_10430182g0010 No alias component RPL17 of LSU proteome component 0.21 Archaeplastida
MA_64923g0010 No alias component RPL17 of LSU proteome component 0.28 Archaeplastida
Mp1g10230.1 No alias component RPL17 of LSU proteome component 0.36 Archaeplastida
Pp3c11_5840V3.1 No alias Ribosomal protein L22p/L17e family protein 0.3 Archaeplastida
Pp3c1_6650V3.1 No alias Ribosomal protein L22p/L17e family protein 0.17 Archaeplastida
Pp3c2_29840V3.1 No alias Ribosomal protein L22p/L17e family protein 0.3 Archaeplastida
Pp3c7_25220V3.1 No alias Ribosomal protein L22p/L17e family protein 0.13 Archaeplastida
Pp3c7_25240V3.1 No alias Ribosomal protein L22p/L17e family protein 0.3 Archaeplastida
Smo96251 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
Solyc03g111230.4.1 No alias component RPL17 of LSU proteome component 0.09 Archaeplastida
Solyc06g071870.3.1 No alias component RPL17 of LSU proteome component 0.3 Archaeplastida
Solyc06g071880.4.1 No alias component RPL17 of LSU proteome component 0.26 Archaeplastida
Zm00001e003661_P001 No alias component RPL17 of LSU proteome component 0.37 Archaeplastida
Zm00001e021953_P003 No alias component RPL17 of LSU proteome component 0.15 Archaeplastida
Zm00001e026882_P002 No alias component RPL17 of LSU proteome component 0.16 Archaeplastida
Zm00001e031261_P001 No alias component RPL17 of LSU proteome component 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005761 mitochondrial ribosome IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 17 152
No external refs found!