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Description : no hits & (original description: none)
Gene families : OG0001447 (Archaeplastida) Phylogenetic Tree(s): OG0001447_tree ,
OG_05_0001490 (LandPlants) Phylogenetic Tree(s): OG_05_0001490_tree ,
OG_06_0002382 (SeedPlants) Phylogenetic Tree(s): OG_06_0002382_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os09g08670.1 | |
| Cluster | HCCA: Cluster_297 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G13990 | No alias | Kinase-related protein of unknown function (DUF1296) | 0.05 | Archaeplastida | |
| Gb_00263 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Gb_30926 | No alias | GBF-interacting protein 1 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
| MA_112169g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_137710g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_768428g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_83690g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mp4g06750.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Smo438753 | No alias | No description available | 0.03 | Archaeplastida | |
| Solyc05g018750.4.1 | No alias | GBF-interacting protein 1 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Solyc07g045230.4.1 | No alias | GBF-interacting protein 1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Solyc07g065745.1.1 | No alias | GBF-interacting protein 1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Solyc12g049230.2.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e022213_P003 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e030777_P002 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida | |
| Zm00001e036221_P007 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint | IEP | Neighborhood |
| BP | GO:0000077 | DNA damage checkpoint | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0006914 | autophagy | IEP | Neighborhood |
| MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Neighborhood |
| MF | GO:0017069 | snRNA binding | IEP | Neighborhood |
| MF | GO:0017070 | U6 snRNA binding | IEP | Neighborhood |
| MF | GO:0030623 | U5 snRNA binding | IEP | Neighborhood |
| MF | GO:0030695 | GTPase regulator activity | IEP | Neighborhood |
| CC | GO:0030896 | checkpoint clamp complex | IEP | Neighborhood |
| BP | GO:0031570 | DNA integrity checkpoint | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Neighborhood |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Neighborhood |
| CC | GO:1902911 | protein kinase complex | IEP | Neighborhood |
| CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009719 | GIP1 | 8 | 67 |
| No external refs found! |