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  5. LOC_Os09g10300.1

LOC_Os09g10300.1


Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes


Gene families : OG0000418 (Archaeplastida) Phylogenetic Tree(s): OG0000418_tree ,
OG_05_0081124 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0070002 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g10300.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AT2G03190 ASK16, SK16 SKP1-like 16 0.02 Archaeplastida
AT2G25700 ASK3, SK3 SKP1-like 3 0.03 Archaeplastida
Pp3c1_36090V3.1 No alias SKP1-like 4 0.02 Archaeplastida
Zm00001e013384_P001 No alias target protein binding component SKP1/ASK1 of... 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 15 70
IPR016072 Skp1_comp_dimer 112 158
No external refs found!