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  5. AMTR_s00009p00264940

AMTR_s00009p00264940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.378

Description : Choline transporter protein 1 OS=Arabidopsis thaliana


Gene families : OG0003297 (Archaeplastida) Phylogenetic Tree(s): OG0003297_tree ,
OG_05_0005824 (LandPlants) Phylogenetic Tree(s): OG_05_0005824_tree ,
OG_06_0005335 (SeedPlants) Phylogenetic Tree(s): OG_06_0005335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00264940
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001542.16 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01014366001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_03567 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_03568 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g58470.1 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_89558g0010 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c13_16790V3.1 No alias Plasma-membrane choline transporter family protein 0.03 Archaeplastida
Solyc07g063230.3.1 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e006509_P001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e024273_P001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004399 histidinol dehydrogenase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006547 histidine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008158 hedgehog receptor activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0030674 protein binding, bridging IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0052803 imidazole-containing compound metabolic process IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 328 674
No external refs found!