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  5. AMTR_s00009p00267500

AMTR_s00009p00267500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.407

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.light chain


Gene families : OG0002368 (Archaeplastida) Phylogenetic Tree(s): OG0002368_tree ,
OG_05_0002034 (LandPlants) Phylogenetic Tree(s): OG_05_0002034_tree ,
OG_06_0002134 (SeedPlants) Phylogenetic Tree(s): OG_06_0002134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00267500
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Solyc07g054180.4.1 No alias light chain of clathrin triskelion 0.03 Archaeplastida
Zm00001e033442_P001 No alias light chain of clathrin triskelion 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
CC GO:0030132 clathrin coat of coated pit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 100 279
No external refs found!