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  5. AMTR_s00009p00267550

AMTR_s00009p00267550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.408

Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.WAPL cohesin cofactor


Gene families : OG0003311 (Archaeplastida) Phylogenetic Tree(s): OG0003311_tree ,
OG_05_0003407 (LandPlants) Phylogenetic Tree(s): OG_05_0003407_tree ,
OG_06_0003401 (SeedPlants) Phylogenetic Tree(s): OG_06_0003401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00267550
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT1G11060 No alias WAPL (Wings apart-like protein regulation of... 0.04 Archaeplastida
GSVIVT01006449001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.04 Archaeplastida
Pp3c9_20340V3.1 No alias WAPL (Wings apart-like protein regulation of... 0.02 Archaeplastida
Zm00001e012602_P001 No alias cohesin cofactor (WAPL) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR022771 WAPL_prot 126 450
No external refs found!