LOC_Os09g16290.1

Description : subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0081054 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0069929 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g16290.1
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AT3G30842	ATPDR10, PDR10	pleiotropic drug resistance 10	0.02	Archaeplastida
AT4G15230	ATPDR2, PDR2	pleiotropic drug resistance 2	0.04	Archaeplastida
Cre04.g224500	No alias	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
Cre09.g395750	No alias	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
Gb_34309	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Gb_34310	No alias	ABC transporter G family member 31 OS=Arabidopsis...	0.03	Archaeplastida
LOC_Os01g42350.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_108793g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_249533g0010	No alias	ABC transporter G family member 31 OS=Arabidopsis...	0.03	Archaeplastida
Mp2g03890.1	No alias	subfamily ABCG transporter	0.01	Archaeplastida
Mp2g21340.1	No alias	subfamily ABCG transporter	0.01	Archaeplastida
Mp4g05490.1	No alias	subfamily ABCG transporter	0.01	Archaeplastida
Pp3c16_13830V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c18_21520V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.01	Archaeplastida
Pp3c19_18700V3.1	No alias	pleiotropic drug resistance 7	0.01	Archaeplastida
Pp3c4_2380V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.01	Archaeplastida
Pp3c5_23360V3.1	No alias	pleiotropic drug resistance 7	0.02	Archaeplastida
Smo122902	No alias	ABC transporter G family member 34 OS=Arabidopsis thaliana	0.03	Archaeplastida
Smo424638	No alias	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
Smo82705	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc12g019620.2.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc12g019640.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e026148_P001	No alias	subfamily ABCG transporter	0.07	Archaeplastida
Zm00001e033689_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e033690_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e039353_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	783	935
IPR003439	ABC_transporter-like	65	228
IPR029481	ABC_trans_N	3	39
IPR013525	ABC_2_trans	1081	1294
IPR013525	ABC_2_trans	411	622
IPR013581	PDR_assoc	627	684

External Links

No external refs found!

LOC_Os09g16290.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation