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  5. LOC_Os09g16380.1

LOC_Os09g16380.1


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0081460 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0070345 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g16380.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g21340.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
LOC_Os12g32814.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Zm00001e019932_P002 No alias subfamily ABCG transporter 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 98 139
IPR013581 PDR_assoc 701 755
IPR003439 ABC_transporter-like 817 969
IPR003439 ABC_transporter-like 166 329
IPR013525 ABC_2_trans 1114 1328
IPR013525 ABC_2_trans 484 696
No external refs found!