Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.420
Description : Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0041736 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0036204 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00009p00268260 | |
Cluster | HCCA: Cluster_52 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00222920 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | Archaeplastida | |
AMTR_s00030p00109240 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.06 | Archaeplastida | |
AMTR_s00177p00030580 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | Archaeplastida | |
AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT4G38010 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Archaeplastida | |
AT5G27110 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
GSVIVT01000086001 | No alias | Pentatricopeptide repeat-containing protein At3g14330... | 0.03 | Archaeplastida | |
GSVIVT01002055001 | No alias | Nucleotide metabolism.deoxynucleotide metabolism.thymidine kinase | 0.07 | Archaeplastida | |
GSVIVT01007645001 | No alias | Pentatricopeptide repeat-containing protein ELI1,... | 0.03 | Archaeplastida | |
GSVIVT01007811001 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.05 | Archaeplastida | |
GSVIVT01009866001 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | Archaeplastida | |
GSVIVT01010654001 | No alias | Pentatricopeptide repeat-containing protein At4g38010... | 0.04 | Archaeplastida | |
GSVIVT01011735001 | No alias | Pentatricopeptide repeat-containing protein At2g01510,... | 0.04 | Archaeplastida | |
GSVIVT01015318001 | No alias | Pentatricopeptide repeat-containing protein At1g77170,... | 0.05 | Archaeplastida | |
GSVIVT01018018001 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.03 | Archaeplastida | |
GSVIVT01018597001 | No alias | RNA processing.organelle machineries.RNA... | 0.06 | Archaeplastida | |
GSVIVT01021268001 | No alias | Pentatricopeptide repeat-containing protein At4g18840... | 0.02 | Archaeplastida | |
GSVIVT01023644001 | No alias | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | Archaeplastida | |
GSVIVT01026141001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | Archaeplastida | |
GSVIVT01026881001 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | Archaeplastida | |
GSVIVT01027839001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | Archaeplastida | |
GSVIVT01033304001 | No alias | Pentatricopeptide repeat-containing protein At2g02980,... | 0.04 | Archaeplastida | |
GSVIVT01033837001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | Archaeplastida | |
GSVIVT01036010001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
GSVIVT01036142001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | Archaeplastida | |
GSVIVT01036943001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | Archaeplastida | |
GSVIVT01037562001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | Archaeplastida | |
Gb_00199 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.07 | Archaeplastida | |
Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | Archaeplastida | |
Gb_01226 | No alias | RNA editing factor (OTP82) | 0.04 | Archaeplastida | |
Gb_02038 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | Archaeplastida | |
Gb_02194 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
Gb_02808 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | Archaeplastida | |
Gb_02911 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | Archaeplastida | |
Gb_03354 | No alias | RNA editing factor (OTP82) | 0.02 | Archaeplastida | |
Gb_03597 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | Archaeplastida | |
Gb_04079 | No alias | RNA editing factor (MEF19) | 0.03 | Archaeplastida | |
Gb_04417 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | Archaeplastida | |
Gb_04419 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_04450 | No alias | OTP70 plastidial RNA splicing factor | 0.03 | Archaeplastida | |
Gb_04828 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | Archaeplastida | |
Gb_05264 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Gb_05354 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | Archaeplastida | |
Gb_05883 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
Gb_05942 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
Gb_06115 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | Archaeplastida | |
Gb_06272 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | Archaeplastida | |
Gb_06560 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | Archaeplastida | |
Gb_07727 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
Gb_08053 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | Archaeplastida | |
Gb_08118 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | Archaeplastida | |
Gb_08745 | No alias | RNA editing factor (OTP82) | 0.03 | Archaeplastida | |
Gb_09361 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | Archaeplastida | |
Gb_09654 | No alias | RNA editing factor (MEF13) | 0.03 | Archaeplastida | |
Gb_10157 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Gb_10158 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
Gb_11925 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | Archaeplastida | |
Gb_12004 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
Gb_12240 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | Archaeplastida | |
Gb_12554 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Gb_13369 | No alias | RNA editing factor (MEF12) | 0.02 | Archaeplastida | |
Gb_13405 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | Archaeplastida | |
Gb_14445 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Gb_14459 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Gb_14617 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | Archaeplastida | |
Gb_15507 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
Gb_15874 | No alias | RNA editing factor (ECB2/VAC1) | 0.04 | Archaeplastida | |
Gb_16288 | No alias | RNA editing factor (OTP82) | 0.04 | Archaeplastida | |
Gb_16664 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
Gb_17177 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_17321 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Gb_18436 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | Archaeplastida | |
Gb_19924 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | Archaeplastida | |
Gb_21441 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_21442 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | Archaeplastida | |
Gb_21555 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Gb_21949 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
Gb_21965 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_22769 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
Gb_23089 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | Archaeplastida | |
Gb_23671 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_24674 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | Archaeplastida | |
Gb_25029 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
Gb_25737 | No alias | RNA editing factor (MEF1) | 0.03 | Archaeplastida | |
Gb_26155 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | Archaeplastida | |
Gb_27468 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Gb_27797 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | Archaeplastida | |
Gb_27833 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
Gb_27879 | No alias | RNA editing factor (ECB2/VAC1) | 0.03 | Archaeplastida | |
Gb_27926 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.08 | Archaeplastida | |
Gb_28030 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | Archaeplastida | |
Gb_28288 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | Archaeplastida | |
Gb_28343 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | Archaeplastida | |
Gb_28762 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | Archaeplastida | |
Gb_30004 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | Archaeplastida | |
Gb_30097 | No alias | RNA editing factor (CRR21) | 0.03 | Archaeplastida | |
Gb_30732 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.04 | Archaeplastida | |
Gb_30991 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Gb_30993 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
Gb_31266 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_32447 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.04 | Archaeplastida | |
Gb_32450 | No alias | RNA editing factor (CRR21) | 0.03 | Archaeplastida | |
Gb_32455 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_32456 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Gb_32457 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
Gb_33062 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_33328 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | Archaeplastida | |
Gb_34963 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Gb_35886 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | Archaeplastida | |
Gb_36085 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
Gb_36260 | No alias | Pentatricopeptide repeat-containing protein At1g09410,... | 0.03 | Archaeplastida | |
Gb_36365 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Gb_36434 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | Archaeplastida | |
Gb_37554 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
Gb_38242 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | Archaeplastida | |
Gb_38297 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Gb_38751 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Gb_40040 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | Archaeplastida | |
Gb_41753 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Gb_41804 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
LOC_Os06g02200.1 | No alias | RNA editing factor (CRR22) | 0.03 | Archaeplastida | |
LOC_Os06g15670.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_10429540g0020 | No alias | Pentatricopeptide repeat-containing protein At4g14850... | 0.08 | Archaeplastida | |
MA_109134g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
MA_39801g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | Archaeplastida | |
MA_46875g0010 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | Archaeplastida | |
MA_8210920g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | Archaeplastida | |
MA_83898g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | Archaeplastida | |
MA_87646g0010 | No alias | RNA editing factor (MEF13) | 0.03 | Archaeplastida | |
MA_8868720g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | Archaeplastida | |
Smo74388 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Solyc01g099000.1.1 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.04 | Archaeplastida | |
Solyc01g100790.1.1 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.05 | Archaeplastida | |
Solyc01g104090.4.1 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.07 | Archaeplastida | |
Solyc02g072020.3.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc02g079380.2.1 | No alias | RNA editing factor (CRR22) | 0.03 | Archaeplastida | |
Solyc02g088650.1.1 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.06 | Archaeplastida | |
Solyc03g116000.1.1 | No alias | Pentatricopeptide repeat-containing protein At3g47530... | 0.03 | Archaeplastida | |
Solyc05g023900.1.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Solyc06g062610.2.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
Solyc06g066080.1.1 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.05 | Archaeplastida | |
Solyc07g005850.3.1 | No alias | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | Archaeplastida | |
Solyc09g010070.1.1 | No alias | Pentatricopeptide repeat-containing protein At4g33990... | 0.06 | Archaeplastida | |
Solyc09g065710.1.1 | No alias | RNA editing factor (OTP86) | 0.03 | Archaeplastida | |
Solyc11g007230.1.1 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.04 | Archaeplastida | |
Solyc12g099850.1.1 | No alias | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | Archaeplastida | |
Zm00001e003562_P001 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.05 | Archaeplastida | |
Zm00001e005246_P001 | No alias | Pentatricopeptide repeat-containing protein At2g41080... | 0.05 | Archaeplastida | |
Zm00001e011519_P001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | Archaeplastida | |
Zm00001e012607_P002 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Zm00001e013116_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Zm00001e015799_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e018346_P001 | No alias | Pentatricopeptide repeat-containing protein At3g29230... | 0.05 | Archaeplastida | |
Zm00001e019452_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e020583_P001 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.04 | Archaeplastida | |
Zm00001e030553_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Zm00001e031396_P001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | Archaeplastida | |
Zm00001e035764_P001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.04 | Archaeplastida | |
Zm00001e041246_P001 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |