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  5. AMTR_s00009p00268480

AMTR_s00009p00268480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.426

Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana


Gene families : OG0000619 (Archaeplastida) Phylogenetic Tree(s): OG0000619_tree ,
OG_05_0000400 (LandPlants) Phylogenetic Tree(s): OG_05_0000400_tree ,
OG_06_0000268 (SeedPlants) Phylogenetic Tree(s): OG_06_0000268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00268480
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034183001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.04 Archaeplastida
LOC_Os03g02440.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.03 Archaeplastida
LOC_Os12g07874.1 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.03 Archaeplastida
Pp3c4_14370V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Smo427312 No alias No description available 0.03 Archaeplastida
Solyc09g010720.3.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.03 Archaeplastida
Solyc10g086430.3.1 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.09 Archaeplastida
Zm00001e000107_P001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 432 464
IPR001680 WD40_repeat 729 751
IPR001680 WD40_repeat 586 617
IPR001680 WD40_repeat 539 575
No external refs found!