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  5. LOC_Os09g23360.1

LOC_Os09g23360.1


Description : Protein trichome birefringence-like 14 OS=Arabidopsis thaliana (sp|q0wps0|tbl14_arath : 499.0)


Gene families : OG0002133 (Archaeplastida) Phylogenetic Tree(s): OG0002133_tree ,
OG_05_0001407 (LandPlants) Phylogenetic Tree(s): OG_05_0001407_tree ,
OG_06_0001769 (SeedPlants) Phylogenetic Tree(s): OG_06_0001769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g23360.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022317001 No alias Protein trichome birefringence-like 16 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_69588g0010 No alias Protein trichome birefringence-like 14 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c20_4820V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 16 0.01 Archaeplastida
Solyc07g008820.3.1 No alias Protein trichome birefringence-like 14 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g042020.3.1 No alias Protein trichome birefringence-like 16 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 73 126
IPR026057 PC-Esterase 127 413
No external refs found!